PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922941.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 411aa MW: 45788 Da PI: 6.8534

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922941.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2.1e-30	200	259	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_022922941.1 200 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 259 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MEIDLSLKID QEQEQEQEHE QEQDQEQVAA SGSREGLAVD INGGEISALQ MEMDRMKEEN 60 KALRRAVEQT TKDYYDLETK IGIIQQNNLT NKASRSFVLF QGNEKKRHDI RNLDLDLEEM 120 SKKKRQARSP PSKEEELKER ELGLSLGLHA NNKEDNHREL QEETREKKKP QRPELLQGMA 180 PPQNRKTRVS VRARCESATM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR 240 CLEDMSILIT TYEGTHNHPL PVGATAMAST ASAAASFMLL DSANTNPNIL NSSSYSPNPN 300 EPSANSFYSP SMANSSTSDL PHSFFHRNFQ PNHLMGSLHG RSWNATDGNK PPLTAESVSA 360 IASDPKFRVA VAAAISTLIN KENNRTTSMP DPIERSSSFG SGKDGDGDAA K

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MEIDLSLKID QEQEQEQEHE QEQDQEQVAA SGSREGLAVD INGGEISALQ MEMDRMKEEN  60
KALRRAVEQT TKDYYDLETK IGIIQQNNLT NKASRSFVLF QGNEKKRHDI RNLDLDLEEM  120
SKKKRQARSP PSKEEELKER ELGLSLGLHA NNKEDNHREL QEETREKKKP QRPELLQGMA  180
PPQNRKTRVS VRARCESATM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR  240
CLEDMSILIT TYEGTHNHPL PVGATAMAST ASAAASFMLL DSANTNPNIL NSSSYSPNPN  300
EPSANSFYSP SMANSSTSDL PHSFFHRNFQ PNHLMGSLHG RSWNATDGNK PPLTAESVSA  360
IASDPKFRVA VAAAISTLIN KENNRTTSMP DPIERSSSFG SGKDGDGDAA K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	125	KKRHDIRNLDLDLEEMSKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	8e-64	WRKY family protein