PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922963.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ERF

Protein Properties

Length: 412aa MW: 46028.2 Da PI: 4.5623

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922963.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.1	9.4e-18	80	130	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p r r +lg+f a eAa a+++a++ ++g XP_022922963.1 80 CKYRGVRQRT-WGKWVAEIREPD----RgSRLWLGTFSNAIEAALAYDEAARTMYG 130 79***999.******82....34*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MSLGDRYSDA ISLPTKRIRK RKSRSRRDPS TVAETLAKWK AYNECVNSCD DGSKPIRKAP 60 AKGSKKGCMK GKGGPMNSNC KYRGVRQRTW GKWVAEIREP DRGSRLWLGT FSNAIEAALA 120 YDEAARTMYG QTARLNLPNI TNTRLLAGSA SDSSTTTSTT TTSSNQSDVC VSEELTMTPQ 180 PVPPDVKIEG EPRTGFPVDH VATSAIDAKF CDQGNDQAAL LGIEFPSMDH FPNFQMDEMF 240 ELRTSDIAIP VSLEKKFQMD EMFELRTSDI AIPVSLEKKV KHESVDGDDE YPDRSSDPFD 300 IQDVLQDFQI DEMFDVEELL SIINSDSMHD QSFLQGNVYD SNNMVPPQPS SSSNQFRYPD 360 EKLLGSLQHM EQPPADVNHG FDFLNEGREE DLNAATDDFA RYLNYEMGGL GF

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MSLGDRYSDA ISLPTKRIRK RKSRSRRDPS TVAETLAKWK AYNECVNSCD DGSKPIRKAP  60
AKGSKKGCMK GKGGPMNSNC KYRGVRQRTW GKWVAEIREP DRGSRLWLGT FSNAIEAALA  120
YDEAARTMYG QTARLNLPNI TNTRLLAGSA SDSSTTTSTT TTSSNQSDVC VSEELTMTPQ  180
PVPPDVKIEG EPRTGFPVDH VATSAIDAKF CDQGNDQAAL LGIEFPSMDH FPNFQMDEMF  240
ELRTSDIAIP VSLEKKFQMD EMFELRTSDI AIPVSLEKKV KHESVDGDDE YPDRSSDPFD  300
IQDVLQDFQI DEMFDVEELL SIINSDSMHD QSFLQGNVYD SNNMVPPQPS SSSNQFRYPD  360
EKLLGSLQHM EQPPADVNHG FDFLNEGREE DLNAATDDFA RYLNYEMGGL GF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	21	28	RKSRSRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	4e-37	ERF family protein