PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022922970.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ERF

Protein Properties

Length: 401aa MW: 44795.8 Da PI: 4.4831

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022922970.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.1	9e-18	69	119	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p r r +lg+f a eAa a+++a++ ++g XP_022922970.1 69 CKYRGVRQRT-WGKWVAEIREPD----RgSRLWLGTFSNAIEAALAYDEAARTMYG 119 79***999.******82....34*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MTVEIAQRKR KSRSRRDPST VAETLAKWKA YNECVNSCDD GSKPIRKAPA KGSKKGCMKG 60 KGGPMNSNCK YRGVRQRTWG KWVAEIREPD RGSRLWLGTF SNAIEAALAY DEAARTMYGQ 120 TARLNLPNIT NTRLLAGSAS DSSTTTSTTT TSSNQSDVCV SEELTMTPQP VPPDVKIEGE 180 PRTGFPVDHV ATSAIDAKFC DQGNDQAALL GIEFPSMDHF PNFQMDEMFE LRTSDIAIPV 240 SLEKKFQMDE MFELRTSDIA IPVSLEKKVK HESVDGDDEY PDRSSDPFDI QDVLQDFQID 300 EMFDVEELLS IINSDSMHDQ SFLQGNVYDS NNMVPPQPSS SSNQFRYPDE KLLGSLQHME 360 QPPADVNHGF DFLNEGREED LNAATDDFAR YLNYEMGGLG F

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MTVEIAQRKR KSRSRRDPST VAETLAKWKA YNECVNSCDD GSKPIRKAPA KGSKKGCMKG  60
KGGPMNSNCK YRGVRQRTWG KWVAEIREPD RGSRLWLGTF SNAIEAALAY DEAARTMYGQ  120
TARLNLPNIT NTRLLAGSAS DSSTTTSTTT TSSNQSDVCV SEELTMTPQP VPPDVKIEGE  180
PRTGFPVDHV ATSAIDAKFC DQGNDQAALL GIEFPSMDHF PNFQMDEMFE LRTSDIAIPV  240
SLEKKFQMDE MFELRTSDIA IPVSLEKKVK HESVDGDDEY PDRSSDPFDI QDVLQDFQID  300
EMFDVEELLS IINSDSMHDQ SFLQGNVYDS NNMVPPQPSS SSNQFRYPDE KLLGSLQHME  360
QPPADVNHGF DFLNEGREED LNAATDDFAR YLNYEMGGLG F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	7	12	QRKRKS
2	10	17	RKSRSRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	3e-37	ERF family protein