PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922972.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 227aa    MW: 25307.2 Da    PI: 5.8926
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922972.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.72.1e-21106154355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+WvAeIr p     +  +r++lg+f taeeAa+a+++a+++++g
  XP_022922972.1 106 YRGVRQRP-WGKWVAEIRNP-----KlaTRVWLGTFNTAEEAARAYDKAALEFRG 154
                     9*******.**********9.....557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MTSRSRSTES PESYHFSFPP HSMADRFWCE LQIPLPTFDC AASASASATT SSITCSSTDA  60
IFSPSVFETC SVCRIDGCLG CDFFPLSSPP VEGETKSGKK RLKKIYRGVR QRPWGKWVAE  120
IRNPKLATRV WLGTFNTAEE AARAYDKAAL EFRGPRAKLN FPFTDDSLRT MRPENEISKN  180
SRNSAANGIE NEDEIWRKLE KDEMDQWISS LITDYGGDSS DSTSIGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-27ERF family protein