PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922981.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 320aa    MW: 35324.1 Da    PI: 4.9985
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922981.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.9e-112422821055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+AveY+k Lq
  XP_022922981.1 242 RKRRERINERLRMLQSLVPNG-----TKVDISTMLEEAVEYVKFLQ 282
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEPIGPISER EWISLSGAYT AEESDFMANL LNNYCLPNEL NPGSSSAVPS ASLAMAPMDE  60
PSYYSNHYYT LNENDSHPPW LPNNGASLSL DFSMEDVRNG DRLDDSGSSR KTRQCRLQQF  120
PAGSSQPEKR AEITVEEATK DDKVASTPVD TNSRKRSPSS YNVEKTKTST RNTRARKSSK  180
IASGSCNEEE DHIVSPNGLC TSSFSSEDDC NGGITSSSTL SSSGKPRASR GSATDPQSLY  240
ARKRRERINE RLRMLQSLVP NGTKVDISTM LEEAVEYVKF LQLQIKLLSS DDLWMYAPIA  300
YNGMDIGLNL KLMKQDNASQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.16e-48bHLH family protein