PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922984.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 389aa    MW: 43318 Da    PI: 4.6004
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922984.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.7e-1880130155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr++  +g+WvAeIr+p     r  r +lg+f  a eAa a+++a++ ++g
  XP_022922984.1  80 CKYRGVRQRT-WGKWVAEIREPD----RgSRLWLGTFSNAIEAALAYDEAARTMYG 130
                     79*****999.**********82....34***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MSLGDRYSDA ISLPTKRIRK RKSRSRRDPS TVAETLAKWK AYNECVNSCD DGSKPIRKAP  60
AKGSKKGCMK GKGGPMNSNC KYRGVRQRTW GKWVAEIREP DRGSRLWLGT FSNAIEAALA  120
YDEAARTMYG QTARLNLPNI TNTRLLAGSA SDSSTTTSTT TTSSNQSDVC VSEELTMTPQ  180
PVPPDVKIEG EPRTGFPVDH VATSAIDAKF CDQGNDQAAL LGIEFPSMDH FPNFQMDEMF  240
ELRTSDIAIP VSLEKKVKHE SVDGDDEYPD RSSDPFDIQD VLQDFQIDEM FDVEELLSII  300
NSDSMHDQSF LQGNVYDSNN MVPPQPSSSS NQFRYPDEKL LGSLQHMEQP PADVNHGFDF  360
LNEGREEDLN AATDDFARYL NYEMGGLGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12128RKSRSRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-38ERF family protein