PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923000.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 203aa    MW: 23337.8 Da    PI: 6.9956
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923000.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.3e-113888153
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53
                    r+  h   Er RR+++ s + +Lr+llP  +     ++ + a+i+ +Av+YI +
  XP_022923000.1 38 RKIVHRDLERERRKQMLSLLTNLRSLLPLqL---VEGRRTRADIVDEAVNYIEH 88
                    56789************************77...9*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MFPFNHPSHH HQPHQLSGCE GSSELNPNKI ESTHNEVRKI VHRDLERERR KQMLSLLTNL  60
RSLLPLQLVE GRRTRADIVD EAVNYIEHFR GKISELHVKR DAIKGLHLDE SSDLCPSSCV  120
VIKPYSGGLE IVISIFREQN LELSEVMRVL LEESIEITSC ASTKVKEMML HTIHTKVDDP  180
TRIDVHELQQ KLYRVCTFVS FGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12540.14e-20bHLH family protein