PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923134.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 289aa    MW: 33024.2 Da    PI: 8.2168
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923134.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.11.9e-35231132101
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++de+++++isw+++g++f+v+++ +fa+++LpkyFkh+nf+SF+RQLn+YgF+kv +++         weF+++ F+kgkk+ll++
  XP_022923134.1  23 FLTKTYQLVDDETIDHVISWNHDGSTFIVWNTITFATDLLPKYFKHNNFTSFLRQLNTYGFRKVVSDR---------WEFANECFRKGKKQLLCE 108
                     9****************************************************************999.........****************** PP

                     XXXXX CS
    HSF_DNA-bind  97 ikrkk 101
                     i+r+k
  XP_022923134.1 109 IQRRK 113
                     ***98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGEPSAKPSP NGGDSQRSMP TPFLTKTYQL VDDETIDHVI SWNHDGSTFI VWNTITFATD  60
LLPKYFKHNN FTSFLRQLNT YGFRKVVSDR WEFANECFRK GKKQLLCEIQ RRKFHTALPS  120
TTPPPQLLAV TGNSSSEEQV ISSDETPTRA FAELIDENDR LRKEKAKLTE QLVEMKSLCN  180
NIFSMMSSFV ECQFKSSFKV RDSVLTPAKS LDLFPVKRPS GEDEAAKTNQ IGAAIGAKRP  240
REYREWATAI AEDDTTLRLQ PPDRSEVKSE RVNCHNKVDD QNTWRNKVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-67HSF family protein