PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923225.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 273aa    MW: 29331 Da    PI: 7.9366
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923225.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18137187255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae Aa a+++a+ +++g
  XP_022923225.1 137 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEYAALAYDRAAYRMRG 187
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MMYGQSNGCE SDFVLLETIR RHLLGDSEPY RCGNYAVAGA AAPGLCGSSN FTSLYPCLTE  60
NWGELPLKVD DSEDMFLAGV LHDAVRLGWD PLLGSSPSEA FNFGFSDVKT EPLILSPAKV  120
EVAAATVPTV IPAKGKHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEYAALAYDR  180
AAYRMRGSKA LLNFPLRVNS GEPDPVRVTS KRSSSRSSPE PTSSSSSVES GSPKRRKKVV  240
AATQAALESI QLVVGTNATQ VEADVAKSTN GEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1233239PKRRKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.14e-58ERF family protein