PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923228.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 386aa MW: 42025.2 Da PI: 9.8468

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923228.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.7e-32	172	225	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022923228.1 172 PRMRWTTTLHARFVHAVEFLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 225 9****************************************************7 PP
2	Myb_DNA-binding	46.7	7.2e-15	173	224	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022923228.1 173 RMRWTTTLHARFVHAVEFLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 224 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MELFGGQPDL SLQISPPNSK PSSNGSWRKQ QAISSIPSQN PLDFLFFNNF PSSFSSSSNF 60 GPSLSNPNPS HFLHHHLLPK ATNVGGGGGG GGGGGGVFHR HPHDLHHQGL GFSTPIRGIP 120 VYQNPPSSSS SSSSYPIFGS GGGGGSGVQF NYNGLRSRFL ARFPAKRSIR APRMRWTTTL 180 HARFVHAVEF LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KIAAGAASSG 240 YDINVENSEV HDQNRSSRDT TTKDTTYETE KSSRTRLNAP ITDSPQHQLS PSFHDEFRKT 300 VGGEQDHRRT HTDLPALWSN SSREALFQGI IPKDSSDNQP SQLDQRYLED KSSSHERTSD 360 GSSLTNLSAG TSPQKPNLEF TLGISI

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MELFGGQPDL SLQISPPNSK PSSNGSWRKQ QAISSIPSQN PLDFLFFNNF PSSFSSSSNF  60
GPSLSNPNPS HFLHHHLLPK ATNVGGGGGG GGGGGGVFHR HPHDLHHQGL GFSTPIRGIP  120
VYQNPPSSSS SSSSYPIFGS GGGGGSGVQF NYNGLRSRFL ARFPAKRSIR APRMRWTTTL  180
HARFVHAVEF LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KIAAGAASSG  240
YDINVENSEV HDQNRSSRDT TTKDTTYETE KSSRTRLNAP ITDSPQHQLS PSFHDEFRKT  300
VGGEQDHRRT HTDLPALWSN SSREALFQGI IPKDSSDNQP SQLDQRYLED KSSSHERTSD  360
GSSLTNLSAG TSPQKPNLEF TLGISI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-51	G2-like family protein