PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923377.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 264aa MW: 27024.2 Da PI: 10.2143

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923377.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.7	6.9e-37	33	118	3	80
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec........eaessss 80 kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++++ ss XP_022923377.1 33 LKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSticaslrgTPAALSS 118 699************************************************************99999766444444443333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MSGSDGVSHN NGAIIPHSQQ STQTTTNNGA LPLKKPPAKD RHSKVDGRGR RIRMPIICAA 60 RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTTPA SFSTICASLR GTPAALSSSA 120 SLDHKPLLPP APFILGKRVR PDDDAGHKDN DGNGGGGGGN GGGGAISVGP SVGSIMGSAA 180 AGGYWAFPAR PDFGQVWSFA AAAAPEMVIQ PTAISHQASL FAQQQSIGEA SAAKVGNYLP 240 GHLNLLASLS GGQGSSGRRD NDHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	8e-66	TCP family protein