PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923403.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 634aa MW: 69679 Da PI: 5.6958

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923403.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.4	1.1e-12	456	501	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L Av YI++L XP_022923403.1 456 NHVEAERQRREKLNQKFYALRAVVPNV-----SKMDKASLLGDAVSYINEL 501 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MTDYRLSTMN LWTDENASLM DAFMNSDLSS YWAPSAASSH SLHNQPPPQS SASTSTPPPD 60 PPKSVAVFNQ ETLQQRLQAL IDGARESWTY AIFWQSSYDY PDGSVLGWGD GYYKGEEDKG 120 KGKAKVVTSA AEQAHRKKVL RDLNSLISGS AAGPDDAVDE EVTDTEWFFL VSMTQSFVNG 180 VGLPSQAFFD STPIWISGAD RLSASACERA RQGKVFGLQT MVCIPSPNGV VEMGSTELIH 240 RTSDLMNKVK ILFNFNNLET SSWISGTTAA ASTADEGEND PSSMWISEPS STIATTVPSG 300 DVPRKLTQSE NHKQSQSFLN FSDYGFESNP SKSITTDTTT TTTTTNTPSF KPESGGMLNF 360 GSGNIFSSHS QYITDEQNEK KRSPPSRSSN DEGILSFTSG VILPSSGKVK SGDSDHSDLE 420 ASVIREVDSC TKSIEPEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ KFYALRAVVP 480 NVSKMDKASL LGDAVSYINE LKSKLQIIET EKTEMGNHLE FIKKEMGGKD LGHYTNTIDQ 540 DLKTGNRKVM DIEIEVKIMG WDAMIRIQSS KKNHPAARLM TALKDLDLEM LHASVSVVND 600 LMIQQATVKM GSRCYTQEQL KMALIARVGG GGMM

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MTDYRLSTMN LWTDENASLM DAFMNSDLSS YWAPSAASSH SLHNQPPPQS SASTSTPPPD  60
PPKSVAVFNQ ETLQQRLQAL IDGARESWTY AIFWQSSYDY PDGSVLGWGD GYYKGEEDKG  120
KGKAKVVTSA AEQAHRKKVL RDLNSLISGS AAGPDDAVDE EVTDTEWFFL VSMTQSFVNG  180
VGLPSQAFFD STPIWISGAD RLSASACERA RQGKVFGLQT MVCIPSPNGV VEMGSTELIH  240
RTSDLMNKVK ILFNFNNLET SSWISGTTAA ASTADEGEND PSSMWISEPS STIATTVPSG  300
DVPRKLTQSE NHKQSQSFLN FSDYGFESNP SKSITTDTTT TTTTTNTPSF KPESGGMLNF  360
GSGNIFSSHS QYITDEQNEK KRSPPSRSSN DEGILSFTSG VILPSSGKVK SGDSDHSDLE  420
ASVIREVDSC TKSIEPEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ KFYALRAVVP  480
NVSKMDKASL LGDAVSYINE LKSKLQIIET EKTEMGNHLE FIKKEMGGKD LGHYTNTIDQ  540
DLKTGNRKVM DIEIEVKIMG WDAMIRIQSS KKNHPAARLM TALKDLDLEM LHASVSVVND  600
LMIQQATVKM GSRCYTQEQL KMALIARVGG GGMM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	438	446	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein