PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923499.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 416aa MW: 45669.3 Da PI: 7.6569

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923499.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.4e-13	239	284	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ K++Ka+ L Av YI++L XP_022923499.1 239 NHVEAERQRRQKLNHRFYALRSVVPNV-----SKMDKASLLADAVVYINEL 284 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MDDFSISSSS SPNSSAHTIQ QRLQFILHNL PQWNGGGSQL ISFGFDDVAV DRVEAGDFSD 60 LEGYYTISIS QMYGGVDNVV GRVFDSSAYI WLTIDESLHL YECDRVKEAR LRGIQTLVFV 120 STSDGVLELG SSELIKEDWS LAQFAKTLFG TFSVSSTQFK QKDHVGVGGG GIIQLQAPPC 180 SGIVKREMNG GRGGGGSSSD SLSDNSDGNF LSMVDNNNVG NKKGKRQAKN KAESTMPVNH 240 VEAERQRRQK LNHRFYALRS VVPNVSKMDK ASLLADAVVY INELKAKVQK MESKLKQSQH 300 QASSSLSNAF DQKRSGISTI EQTVSSTSYA MNNGYNNNTV EVQLVGAEAI VRVHCRDENY 360 PSARLMNVLK DLGLQVRQAS LSSVNDIMLQ DVVIRVPQGV ALREKTLRTA ILQRLE

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MDDFSISSSS SPNSSAHTIQ QRLQFILHNL PQWNGGGSQL ISFGFDDVAV DRVEAGDFSD  60
LEGYYTISIS QMYGGVDNVV GRVFDSSAYI WLTIDESLHL YECDRVKEAR LRGIQTLVFV  120
STSDGVLELG SSELIKEDWS LAQFAKTLFG TFSVSSTQFK QKDHVGVGGG GIIQLQAPPC  180
SGIVKREMNG GRGGGGSSSD SLSDNSDGNF LSMVDNNNVG NKKGKRQAKN KAESTMPVNH  240
VEAERQRRQK LNHRFYALRS VVPNVSKMDK ASLLADAVVY INELKAKVQK MESKLKQSQH  300
QASSSLSNAF DQKRSGISTI EQTVSSTSYA MNNGYNNNTV EVQLVGAEAI VRVHCRDENY  360
PSARLMNVLK DLGLQVRQAS LSSVNDIMLQ DVVIRVPQGV ALREKTLRTA ILQRLE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	196	GGRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	4e-40	bHLH family protein