PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923583.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 742aa MW: 81984 Da PI: 4.8082

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923583.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00031	561	598	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_022923583.1 561 RQQIQDRLKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 598 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MAETELGSVL NRICSTNHWS YGVFWSFDRR NSMVLTLEDI WYEEQVGLVA ANMLQQVHML 60 GEGAIGTAAF TGKHRWMFSD ASFGEWNSSM FQDNLEFQQQ FSCGIKTVAV IPVHPHGVIQ 120 LGSTHKIWES FEFLADAKRS LSQVINSGGH VQEKTMPMAS SADIFHFNEL FTSFIMSSNS 180 DDWSLGAVHN NSRTDFAGKS YASIDKQPAV LASSEPMPTS NIREQDAQYP SYLDADMLDS 240 CRNLVEYGHH SSKIATVSSG TGSLCMDNVQ QSARFPVIEG ELVESMTSRP DFCDEHLSED 300 FTMDLPDISL IDDLFQWFDS SPENGTNGAT TAVNDNLPQS RGVSTLSSNL VEACKFVDGS 360 SKTSVVSARS CITNASQSSE QDNTIITQGA KDRLFDSLGL GTEAHESYSG GCNSMSTCSS 420 NLATGSTDLP RKRLFWELGI EELLDGRSNT SSTTKSSVEN HQSIASRRSK MERLLFETNP 480 IQLLDPCTNV NPTQSSGTAD RFPCKKEAIP KSPVSSWIDD SYSTNIGGSI LELSRKSEEP 540 VKTCKKRARP GESNRPRPKD RQQIQDRLKE LRGIIPSGAK CSIDSLLDRT IKYMLFLQSV 600 TKYADKLKET HEPKLIDQDD GVAVNDKCTT ERGSGGVTWA YKVGTTPIVC PVIVEDLSSP 660 GQMLIEMLCE ERGFFLEIAD MIRGYGLTIL KGVMEVREDK IWAQFVVEVK LNTNQSITRI 720 NVFLSLMELL QQANISGAEL AS

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MAETELGSVL NRICSTNHWS YGVFWSFDRR NSMVLTLEDI WYEEQVGLVA ANMLQQVHML  60
GEGAIGTAAF TGKHRWMFSD ASFGEWNSSM FQDNLEFQQQ FSCGIKTVAV IPVHPHGVIQ  120
LGSTHKIWES FEFLADAKRS LSQVINSGGH VQEKTMPMAS SADIFHFNEL FTSFIMSSNS  180
DDWSLGAVHN NSRTDFAGKS YASIDKQPAV LASSEPMPTS NIREQDAQYP SYLDADMLDS  240
CRNLVEYGHH SSKIATVSSG TGSLCMDNVQ QSARFPVIEG ELVESMTSRP DFCDEHLSED  300
FTMDLPDISL IDDLFQWFDS SPENGTNGAT TAVNDNLPQS RGVSTLSSNL VEACKFVDGS  360
SKTSVVSARS CITNASQSSE QDNTIITQGA KDRLFDSLGL GTEAHESYSG GCNSMSTCSS  420
NLATGSTDLP RKRLFWELGI EELLDGRSNT SSTTKSSVEN HQSIASRRSK MERLLFETNP  480
IQLLDPCTNV NPTQSSGTAD RFPCKKEAIP KSPVSSWIDD SYSTNIGGSI LELSRKSEEP  540
VKTCKKRARP GESNRPRPKD RQQIQDRLKE LRGIIPSGAK CSIDSLLDRT IKYMLFLQSV  600
TKYADKLKET HEPKLIDQDD GVAVNDKCTT ERGSGGVTWA YKVGTTPIVC PVIVEDLSSP  660
GQMLIEMLCE ERGFFLEIAD MIRGYGLTIL KGVMEVREDK IWAQFVVEVK LNTNQSITRI  720
NVFLSLMELL QQANISGAEL AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-48	bHLH family protein