PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923584.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 731aa MW: 80528.5 Da PI: 4.7341

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923584.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00031	550	587	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_022923584.1 550 RQQIQDRLKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 587 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MAFFGALIEE TPCCVVGVYA YRVLTLEDIW YEEQVGLVAA NMLQQVHMLG EGAIGTAAFT 60 GKHRWMFSDA SFGEWNSSMF QDNLEFQQQF SCGIKTVAVI PVHPHGVIQL GSTHKIWESF 120 EFLADAKRSL SQVINSGGHV QEKTMPMASS ADIFHFNELF TSFIMSSNSD DWSLGAVHNN 180 SRTDFAGKSY ASIDKQPAVL ASSEPMPTSN IREQDAQYPS YLDADMLDSC RNLVEYGHHS 240 SKIATVSSGT GSLCMDNVQQ SARFPVIEGE LVESMTSRPD FCDEHLSEDF TMDLPDISLI 300 DDLFQWFDSS PENGTNGATT AVNDNLPQSR GVSTLSSNLV EACKFVDGSS KTSVVSARSC 360 ITNASQSSEQ DNTIITQGAK DRLFDSLGLG TEAHESYSGG CNSMSTCSSN LATGSTDLPR 420 KRLFWELGIE ELLDGRSNTS STTKSSVENH QSIASRRSKM ERLLFETNPI QLLDPCTNVN 480 PTQSSGTADR FPCKKEAIPK SPVSSWIDDS YSTNIGGSIL ELSRKSEEPV KTCKKRARPG 540 ESNRPRPKDR QQIQDRLKEL RGIIPSGAKC SIDSLLDRTI KYMLFLQSVT KYADKLKETH 600 EPKLIDQDDG VAVNDKCTTE RGSGGVTWAY KVGTTPIVCP VIVEDLSSPG QMLIEMLCEE 660 RGFFLEIADM IRGYGLTILK GVMEVREDKI WAQFVVEVKL NTNQSITRIN VFLSLMELLQ 720 QANISGAELA S

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MAFFGALIEE TPCCVVGVYA YRVLTLEDIW YEEQVGLVAA NMLQQVHMLG EGAIGTAAFT  60
GKHRWMFSDA SFGEWNSSMF QDNLEFQQQF SCGIKTVAVI PVHPHGVIQL GSTHKIWESF  120
EFLADAKRSL SQVINSGGHV QEKTMPMASS ADIFHFNELF TSFIMSSNSD DWSLGAVHNN  180
SRTDFAGKSY ASIDKQPAVL ASSEPMPTSN IREQDAQYPS YLDADMLDSC RNLVEYGHHS  240
SKIATVSSGT GSLCMDNVQQ SARFPVIEGE LVESMTSRPD FCDEHLSEDF TMDLPDISLI  300
DDLFQWFDSS PENGTNGATT AVNDNLPQSR GVSTLSSNLV EACKFVDGSS KTSVVSARSC  360
ITNASQSSEQ DNTIITQGAK DRLFDSLGLG TEAHESYSGG CNSMSTCSSN LATGSTDLPR  420
KRLFWELGIE ELLDGRSNTS STTKSSVENH QSIASRRSKM ERLLFETNPI QLLDPCTNVN  480
PTQSSGTADR FPCKKEAIPK SPVSSWIDDS YSTNIGGSIL ELSRKSEEPV KTCKKRARPG  540
ESNRPRPKDR QQIQDRLKEL RGIIPSGAKC SIDSLLDRTI KYMLFLQSVT KYADKLKETH  600
EPKLIDQDDG VAVNDKCTTE RGSGGVTWAY KVGTTPIVCP VIVEDLSSPG QMLIEMLCEE  660
RGFFLEIADM IRGYGLTILK GVMEVREDKI WAQFVVEVKL NTNQSITRIN VFLSLMELLQ  720
QANISGAELA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-48	bHLH family protein