PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923586.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 383aa    MW: 42479.6 Da    PI: 8.4872
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923586.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70225.15.1e-085086541
          DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvks 41
                    + +C+ CGn a+  C +e C+ CC  +   C+ hv  
  XP_022923586.1 50 KPKCRVCGNVARSRCPYESCKSCCARNQNPCHIHVLK 86
                    568*******************************943 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MAAPSPTVSN NSSDTANTTA SAVTVNAAVS SNHLANRTAT PPKTLRGLNK PKCRVCGNVA  60
RSRCPYESCK SCCARNQNPC HIHVLKANAT FTDKTPSSSS PLFDKQSADP SSSGTSHRVA  120
SLRQLSSNFS QFNNVQIPLR SRKPLTRKDA AAINEWRFSK LREFRERHIE AENEAFDRYM  180
KNVDLLEEVF SMKSMVDGSL KDGPSNFSTE GTEEVIPGLK LSLGSGSDDS RKRIREIVED  240
GLMKLQKVEA TDNVDEVTDQ VESGKVADQT NRNDGCTTVK GWHAKRARAL GDLIDKLNKA  300
RNEEDLKSCL AMKHQLFNQH ITSSQTESEE TDVPKEQVIK KDLDSRKELG YSLPKLINKT  360
IIDQETLNRI DAHFSSLKQI DNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.13e-84SRS family protein