PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923710.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 602aa MW: 64884.6 Da PI: 7.7665

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923710.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.7	6.6e-30	261	320	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_022923710.1 261 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 320 58************************888**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MEAAAAPAFG RPRPVVKPEK PAGDSDDDRN SPSNQSLLIK TYQKENHGKE EHESEDKTSN 60 SSDQKDLSCT KIQEEQLESA RTEMGEVREE NQRLKMSLGQ IMKDYEALKM QFLGIVGREA 120 KKLPEHDKEQ RQRPHDDQTE ETDLVSLTLG RYPMAEKKKA AEEKNINGGD KEEAVKQALS 180 LGLNCKFEQE STPATVKEAH SPNRSLTISA DHETKEDAGE TNWPPSKGLK TMRSADDDAL 240 PPNPPKRARV CVRARCETTT MNDGCQWRKY GQKIAKGNPC PRAYYRCTGS PTCPVRKQVQ 300 RCADDMSILI TTYEGNHNHP LPASATAMAS TTSAAASMLL SGSSTSSAPN TTAAASSSSS 360 SSNHALSFYS NSKQNFYLPN NSSIISSTSP THPTITLDLT SNPSSTSNPS THFGKFPSSF 420 PNSRYPFTSQ LDFGSSRNNV LSWNNGVLSY NRNSHPATTP TNNIYQNYIQ HQRNTAMSLP 480 HQQPPLPDTI AAATKAITAD PSFQSALAAA LTSIIGSGGA GTGTVKSSAR SEQPLFQLTS 540 TATTTTNKGN GCGTSFLSNI TTATPSNSPP TGNMAFVPAS SLPFSNPKSA SASPGDHIDL 600 TN

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MEAAAAPAFG RPRPVVKPEK PAGDSDDDRN SPSNQSLLIK TYQKENHGKE EHESEDKTSN  60
SSDQKDLSCT KIQEEQLESA RTEMGEVREE NQRLKMSLGQ IMKDYEALKM QFLGIVGREA  120
KKLPEHDKEQ RQRPHDDQTE ETDLVSLTLG RYPMAEKKKA AEEKNINGGD KEEAVKQALS  180
LGLNCKFEQE STPATVKEAH SPNRSLTISA DHETKEDAGE TNWPPSKGLK TMRSADDDAL  240
PPNPPKRARV CVRARCETTT MNDGCQWRKY GQKIAKGNPC PRAYYRCTGS PTCPVRKQVQ  300
RCADDMSILI TTYEGNHNHP LPASATAMAS TTSAAASMLL SGSSTSSAPN TTAAASSSSS  360
SSNHALSFYS NSKQNFYLPN NSSIISSTSP THPTITLDLT SNPSSTSNPS THFGKFPSSF  420
PNSRYPFTSQ LDFGSSRNNV LSWNNGVLSY NRNSHPATTP TNNIYQNYIQ HQRNTAMSLP  480
HQQPPLPDTI AAATKAITAD PSFQSALAAA LTSIIGSGGA GTGTVKSSAR SEQPLFQLTS  540
TATTTTNKGN GCGTSFLSNI TTATPSNSPP TGNMAFVPAS SLPFSNPKSA SASPGDHIDL  600
TN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	6e-59	WRKY family protein