PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923712.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 569aa MW: 61077.6 Da PI: 8.3157

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923712.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.8	6.1e-30	228	287	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_022923712.1 228 MNDGCQWRKYGQKIAKGNPCPRAYYRCTGSpTCPVRKQVQRCADDMSILITTYEGNHNHP 287 58************************888**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MEAAAAPAFG RPRPVVKPEK PAGDSDDDRN SPSNQSLLIK EEQLESARTE MGEVREENQR 60 LKMSLGQIMK DYEALKMQFL GIVGREAKKL PEHDKEQRQR PHDDQTEETD LVSLTLGRYP 120 MAEKKKAAEE KNINGGDKEE AVKQALSLGL NCKFEQESTP ATVKEAHSPN RSLTISADHE 180 TKEDAGETNW PPSKGLKTMR SADDDALPPN PPKRARVCVR ARCETTTMND GCQWRKYGQK 240 IAKGNPCPRA YYRCTGSPTC PVRKQVQRCA DDMSILITTY EGNHNHPLPA SATAMASTTS 300 AAASMLLSGS STSSAPNTTA AASSSSSSSN HALSFYSNSK QNFYLPNNSS IISSTSPTHP 360 TITLDLTSNP SSTSNPSTHF GKFPSSFPNS RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN 420 SHPATTPTNN IYQNYIQHQR NTAMSLPHQQ PPLPDTIAAA TKAITADPSF QSALAAALTS 480 IIGSGGAGTG TVKSSARSEQ PLFQLTSTAT TTTNKGNGCG TSFLSNITTA TPSNSPPTGN 540 MAFVPASSLP FSNPKSASAS PGDHIDLTN

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MEAAAAPAFG RPRPVVKPEK PAGDSDDDRN SPSNQSLLIK EEQLESARTE MGEVREENQR  60
LKMSLGQIMK DYEALKMQFL GIVGREAKKL PEHDKEQRQR PHDDQTEETD LVSLTLGRYP  120
MAEKKKAAEE KNINGGDKEE AVKQALSLGL NCKFEQESTP ATVKEAHSPN RSLTISADHE  180
TKEDAGETNW PPSKGLKTMR SADDDALPPN PPKRARVCVR ARCETTTMND GCQWRKYGQK  240
IAKGNPCPRA YYRCTGSPTC PVRKQVQRCA DDMSILITTY EGNHNHPLPA SATAMASTTS  300
AAASMLLSGS STSSAPNTTA AASSSSSSSN HALSFYSNSK QNFYLPNNSS IISSTSPTHP  360
TITLDLTSNP SSTSNPSTHF GKFPSSFPNS RYPFTSQLDF GSSRNNVLSW NNGVLSYNRN  420
SHPATTPTNN IYQNYIQHQR NTAMSLPHQQ PPLPDTIAAA TKAITADPSF QSALAAALTS  480
IIGSGGAGTG TVKSSARSEQ PLFQLTSTAT TTTNKGNGCG TSFLSNITTA TPSNSPPTGN  540
MAFVPASSLP FSNPKSASAS PGDHIDLTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-59	WRKY family protein