PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923717.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WOX
Protein Properties Length: 341aa    MW: 38039.5 Da    PI: 6.9153
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923717.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox69.15.4e-2282141357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eql++Leel+++ +r+psa+++++++++l    +++ ++V++WFqN++a+e++
  XP_022923717.1  82 SRWNPTPEQLRVLEELYRRgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 141
                     7*****************99**************************************97 PP
2Wus_type_Homeobox118.23.6e-3881143365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ+++Leely++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+
     XP_022923717.1  81 SSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 143
                        79***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MWMMGYNDAG DLNFPTDSFT PRRLRPLLPR PLSSLSSTAA VNPPFNLIHT NDFFSQFHHM  60
ATVTDQTKRE LNNAPPPVVV SSRWNPTPEQ LRVLEELYRR GTRTPSADQI QHITAQLRRY  120
GKIEGKNVFY WFQNHKARER QKRRRQMESA ITADHSAPEP GILERKDSGS GRTVYEEQTK  180
NWAPSSNCTT LPEESAPIQP PPTPCTTHRG WIQFQSLVQN NNNPPSSSLH FMHSPPTTAL  240
DGGGAQLMMN TAPIPTTTAA TSTVTTIMHS KSHSNIGGFA PNGVEELEES EEAETLQLFP  300
LCSESRNGEI SEGKNGFETV GSSANITPLQ FFEFLPLKNS P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.13e-51WOX family protein