PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923779.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 223aa MW: 24914.7 Da PI: 10.3501

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923779.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	88.6	1.4e-27	53	157	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....ssssasec...eaesssssasnsssg.. 88 g+kdrhsk++T +g+RdRR+Rlsa++a++++dLq++LG+ ++sk i+WL+ i++l+ + +++++ ++ + ++ +a++++ + XP_022923779.1 53 GGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRVDIDKLPPLhfpkDFDPNASFlhlDIADAAAKAKHEE-Tgm 146 78*************************************************************5555333332222321111111111111.124 PP TCP 89 ..........k 89 + XP_022923779.1 147 lllqklspspN 157 44443333332 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MTGRVNNMIS RLKPEGVHVE AKQMEGKRKK GPSRQGPFLR GNPRIFRVSP LFGGKDRHSK 60 VCTMKGLRDR RIRLSAPTAI QLYDLQNRLG LSQPSKVIDW LIDVTRVDID KLPPLHFPKD 120 FDPNASFLHL DIADAAAKAK HEETGMLLLQ KLSPSPNNAS FSALQLQTNA MTENCCHFDP 180 PSFPFPLMDQ ANPASFSSPS EQLLFRPLTM PPEVSSYLRN GGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	4e-41	TCP family protein