PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923826.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 250aa MW: 28676.9 Da PI: 5.0498

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923826.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.2	9.1e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv++yLk+k++g+ +el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v+ XP_022923826.1 6 LPPGFRFHPTDEELVNYYLKRKISGQVIEL-DIIPEVDLYKCEPWELSeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVT 99 79**************************.99**********84335556888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++++g+kktLv+y+grap+g +tdWvmheyrl XP_022923826.1 100 S-HQRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MAPVGLPPGF RFHPTDEELV NYYLKRKISG QVIELDIIPE VDLYKCEPWE LSEKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVTS HQRAIGMKKT LVYYRGRAPQ 120 GIRTDWVMHE YRLDDKDCED SSGIQDSYAL CRVFKKNGIC SEVEEQLSGQ SSSSSSLSFI 180 DNSNSTSQTL VNDYETLSPD VLMPPPSSSC VEEEEKDDSW MQFITEDAWC ASNSSPIALH 240 DLSHLTFTTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-130	NAC family protein