PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923869.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 575aa MW: 63719.4 Da PI: 8.4716

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923869.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.6	7.2e-11	266	325	2	55
HHHHHHHHHHHHHHHHH..........HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNs..........afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN+ +f++LrellP + ++K +Ka+ L +++eYI+ Lq XP_022923869.1 266 RSKHSATEQRRRSKINDrqdftdiltcRFQKLRELLPCS----DQKRDKASFLLEVIEYIQFLQ 325 889************55555555555******9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MELPQPSRPL GTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFRTTHDFL QPLERIEKTC 60 AKKEQTMNVS TVERAAPPLA TQARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVLP 120 VPQASNTDKS DDNSRCSSLS ASSFTLWEES AVKKGKTRKE NLSEKPGLRA EPPAKMEQWA 180 VSTERPIQSS CSSFSSLSSS QPSGQQKRSF GEMLKSAANV SSKEEELDDG KEFVIKKESS 240 PSTAYRGDLR INVGGKCSGQ KANTPRSKHS ATEQRRRSKI NDRQDFTDIL TCRFQKLREL 300 LPCSDQKRDK ASFLLEVIEY IQFLQEKVRK YESSPPQGWY DEPAKLLPCR NNCNPARCYI 360 DQSQVAKSGP VFIFAGCDQK NMSHFPAFLP RCSHNPVESN TSTTFGEADH HHLGSTNKAT 420 SYPMLGPRRF IPVTSEGEKT KIYSQVAHNA DKKPYEMQQL LCETRACTTD IAAVDNKLKE 480 PEQSIEGGRI SISSAYSQEL LKILTQALQS SGVDMSQASI AVQIELGKRT NCRDTAANPA 540 IVDDSARPSE RAVVGTRVAA AEEDMEQAFR KKQNT

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MELPQPSRPL GTEGRKPTHD FLSLYSHSTA DQQDPSQSFQ GGFRTTHDFL QPLERIEKTC  60
AKKEQTMNVS TVERAAPPLA TQARNSPVER LLPGGIGSCI IGHISYFNHR VPKTEGSVLP  120
VPQASNTDKS DDNSRCSSLS ASSFTLWEES AVKKGKTRKE NLSEKPGLRA EPPAKMEQWA  180
VSTERPIQSS CSSFSSLSSS QPSGQQKRSF GEMLKSAANV SSKEEELDDG KEFVIKKESS  240
PSTAYRGDLR INVGGKCSGQ KANTPRSKHS ATEQRRRSKI NDRQDFTDIL TCRFQKLREL  300
LPCSDQKRDK ASFLLEVIEY IQFLQEKVRK YESSPPQGWY DEPAKLLPCR NNCNPARCYI  360
DQSQVAKSGP VFIFAGCDQK NMSHFPAFLP RCSHNPVESN TSTTFGEADH HHLGSTNKAT  420
SYPMLGPRRF IPVTSEGEKT KIYSQVAHNA DKKPYEMQQL LCETRACTTD IAAVDNKLKE  480
PEQSIEGGRI SISSAYSQEL LKILTQALQS SGVDMSQASI AVQIELGKRT NCRDTAANPA  540
IVDDSARPSE RAVVGTRVAA AEEDMEQAFR KKQNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	5e-84	bHLH family protein