PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022923991.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HD-ZIP
Protein Properties Length: 332aa    MW: 37023.7 Da    PI: 4.4307
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022923991.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.52.7e-19104157356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++++q++ Le+ Fe ++++  e++ +LAk lgL+ rqV +WFqNrRa++k
  XP_022923991.1 104 KKRRLSADQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWK 157
                     56689************************************************9 PP
2HD-ZIP_I/II132.22e-42103194192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekkrrls++qv++LE+sFe+e+kLeperKv+la++Lglqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk++ e+L ke+++L++e+ 
  XP_022923991.1 103 EKKRRLSADQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGNLKADYENLLKEKDSLKAEIV 194
                     69**************************************************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MAGRRVYGGG DGGSISGVSS NHSVLLHNRG GSFASEPLSA LFLSGSSSST SPSLLDCSGI  60
GSRSMMSFED IRGGNGSNRS FFCPFDNEDN GDEDLDDYFH HPEKKRRLSA DQVRFLEKSF  120
ETENKLEPER KVQLAKDLGL QPRQVAIWFQ NRRARWKTKQ LEKDYEALQS SYGNLKADYE  180
NLLKEKDSLK AEIVVLTDKL ILKDKERSNS VVSEDDKFGE EPPQNLVDEA SKSSKLGCKQ  240
EDMSSVKSDI FDSDSPHYTD GVHSSLLDPG DSSYIFDPDQ SDLSQDEEDN LGKNLLPPCI  300
FPKLEDVDYS DPPTSSCNFV FPIEDNALWS WS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152160RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.15e-47HD-ZIP family protein