PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022923992.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 327aa MW: 36548.1 Da PI: 4.4602

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022923992.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.5	2.7e-19	99	152	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q++ Le+ Fe ++++ e++ +LAk lgL+ rqV +WFqNrRa++k XP_022923992.1 99 KKRRLSADQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWK 152 56689************************************************9 PP
2	HD-ZIP_I/II	132.2	1.9e-42	98	189	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrls++qv++LE+sFe+e+kLeperKv+la++Lglqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk++ e+L ke+++L++e+ XP_022923992.1 98 EKKRRLSADQVRFLEKSFETENKLEPERKVQLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGNLKADYENLLKEKDSLKAEIV 189 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MAGRRVYGGG DGGSISGVSS NHSVLLHNRG GSFASEPLSA LFLSGSSSST SPSLLGSRSM 60 MSFEDIRGGN GSNRSFFCPF DNEDNGDEDL DDYFHHPEKK RRLSADQVRF LEKSFETENK 120 LEPERKVQLA KDLGLQPRQV AIWFQNRRAR WKTKQLEKDY EALQSSYGNL KADYENLLKE 180 KDSLKAEIVV LTDKLILKDK ERSNSVVSED DKFGEEPPQN LVDEASKSSK LGCKQEDMSS 240 VKSDIFDSDS PHYTDGVHSS LLDPGDSSYI FDPDQSDLSQ DEEDNLGKNL LPPCIFPKLE 300 DVDYSDPPTS SCNFVFPIED NALWSWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	155	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-45	HD-ZIP family protein