PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924044.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 312aa    MW: 34763.9 Da    PI: 7.4348
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924044.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.94.9e-181562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++q+G+g+W++++   g+ R+ k+c++rw +yl
   XP_022924044.1 15 KGPWTPEEDIILVSYIQQHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 62
                     79******************************99************97 PP
2Myb_DNA-binding48.52e-1568113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022924044.1  68 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 113
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MMGRPPCCDK VGVKKGPWTP EEDIILVSYI QQHGPGNWRS VPTNTGLLRC SKSCRLRWTN  60
YLRPGIKRGN FTDHEEKMII HLQALLGNRW AAIASYLPQR TDNDIKNYWN THLKKKLKRV  120
QSGPDGGAQD RFTPSQTTTL SRGQWERRLQ TDIHTAKRAL CEALSLDKQN PFGIIEDSKP  180
QTNNLILQSP PPPTTTTTTT SAYASSAENI ARLLENWMKK SPEKSSEITT QACVSEGSQS  240
ATNGNNSPDG PTLDDSSCFL NFNNTSSTST ANQEVPLTFL EKWLFDDAAL ANVHTDEDLI  300
SVSLEPQTEG LF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.11e-108MYB family protein