PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924083.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 337aa MW: 37403.1 Da PI: 7.8754

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924083.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.9	1e-09	164	211	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ +L++l+P + +k Ka +L + ++Y++sLq XP_022924083.1 164 SHSLAERVRREKISERMKTLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 211 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MAAFSYQYQP VLLDSMFFPN NSYKMGGFLD DPNFNTNCFL QFQEQQQQQQ PIYHFPDISN 60 QTPESSTLVD RSDSADPPAV TVTVTSPCSK KRKSRNTSSA TSAQSKGTTE STGKKQKSKG 120 ELDEHKEGDP KPKNGKKEEK KVSDGAATKG YIHVRARRGQ ATDSHSLAER VRREKISERM 180 KTLQRLVPGC DKVTGKALML DEIINYVQSL QNQVEFLSMK LASLNPIFFD FRMDLDGLMI 240 QPETPSLSTI TPQLPAMAQC SGAVIDTTPP TTPTPAISAA NNYPLMDPSA NNMFLMSPSA 300 YSPSSQDYVK VSSWDVEEQK RKLLISSGIG DNLCYFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	119	KKRKSRNTSSATSAQSKGTTESTGKKQKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	3e-55	bHLH family protein