PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924085.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 235aa MW: 26968.2 Da PI: 10.0577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924085.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.7e-17	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed++l ++v+++G+++W++Ia+++ gR++k+c++rw++ XP_022924085.1 4 RGHWRPAEDDKLRELVERYGPHNWNAIAQKLL-GRSGKSCRLRWFNQ 49 899**************************9.*********996 PP
2	Myb_DNA-binding	51.4	2.4e-16	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l ++ +G++ W+ Iar ++ gRt++ +k++w+ XP_022924085.1 56 RSPFTEEEEERLMTSHRVHGNR-WAIIARLFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MCSRGHWRPA EDDKLRELVE RYGPHNWNAI AQKLLGRSGK SCRLRWFNQL DPRINRSPFT 60 EEEEERLMTS HRVHGNRWAI IARLFPGRTD NAVKNHWHVI MARKSRDSSK AKAKAKAKTK 120 TKTLTPSSQN HLLFSSFLQT SCPPNNNASL FLNHSLYPNP ISSFIPKPTD RSVEFYDFLH 180 LNAESINASE VIDNSRKEDY EEVNQEATAT AARPLFPFID FFSAQTSNSI SSSHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	5e-79	MYB family protein