PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924093.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 408aa MW: 45603.2 Da PI: 8.7774

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924093.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73	3.3e-23	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_022924093.1 23 RKQKSLGLLCSNFLSLYNHDGVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79***************999********.....****************************98 PP
2	E2F_TDP	76.5	2.7e-24	158	238	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s+ +++l+e+ak L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g XP_022924093.1 158 RREKSLALLTQNFVKLFICSHVSMISLDEAAKLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthtadTRKPAFRWLG 238 689************************************999**********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS 120 DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KAVSADNRRE KSLALLTQNF VKLFICSHVS 180 MISLDEAAKL LLGDGHNSSI MRTKVRRLYD IANVLSSMNL IEKTHTADTR KPAFRWLGVR 240 GKVKNEPTVL PESRKRAFGT DVTNVSYKKT KAESSAYQGL NHCLNVQKLV QCENSSQEDS 300 QNSQDQECER TSKSYQFGPF SPITVAKVSV SDNNNVKRSH DWESLSSTFR PQYHNQALPP 360 VYNFQLFFST LLMFDIVTFI ALKELFSHYV EAWKSWYSEA VKKPIQIS

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS  120
DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KAVSADNRRE KSLALLTQNF VKLFICSHVS  180
MISLDEAAKL LLGDGHNSSI MRTKVRRLYD IANVLSSMNL IEKTHTADTR KPAFRWLGVR  240
GKVKNEPTVL PESRKRAFGT DVTNVSYKKT KAESSAYQGL NHCLNVQKLV QCENSSQEDS  300
QNSQDQECER TSKSYQFGPF SPITVAKVSV SDNNNVKRSH DWESLSSTFR PQYHNQALPP  360
VYNFQLFFST LLMFDIVTFI ALKELFSHYV EAWKSWYSEA VKKPIQIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-121	E2F/DP family protein