PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924094.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family E2F/DP
Protein Properties Length: 405aa    MW: 45345.9 Da    PI: 8.7774
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924094.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP733.2e-232388171
         E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                    rk+ksL+ll+++fl+l+++     + l+++a++L    v  +rRRiYDi+NVLe+++++++k+kn+++w+g
  XP_022924094.1 23 RKQKSLGLLCSNFLSLYNHDGVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88
                    79*****************999************...**..****************************98 PP
2E2F_TDP76.52.7e-24155235171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                     r+eksL lltq+f+kl+ +s+  +++l+e+ak L+ +      +++k+RR+YDi+NVL+++nliek     ++k+++rw g
  XP_022924094.1 155 RREKSLALLTQNFVKLFICSHVSMISLDEAAKLLLGDghnssIMRTKVRRLYDIANVLSSMNLIEKthtadTRKPAFRWLG 235
                     689**************************************999**************************99*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS  120
DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KADNRREKSL ALLTQNFVKL FICSHVSMIS  180
LDEAAKLLLG DGHNSSIMRT KVRRLYDIAN VLSSMNLIEK THTADTRKPA FRWLGVRGKV  240
KNEPTVLPES RKRAFGTDVT NVSYKKTKAE SSAYQGLNHC LNVQKLVQCE NSSQEDSQNS  300
QDQECERTSK SYQFGPFSPI TVAKVSVSDN NNVKRSHDWE SLSSTFRPQY HNQALPPVYN  360
FQLFFSTLLM FDIVTFIALK ELFSHYVEAW KSWYSEAVKK PIQIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-122E2F/DP family protein