PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924095.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 389aa MW: 43386.6 Da PI: 8.6223

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924095.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73.1	3e-23	23	88	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++w+g XP_022924095.1 23 RKQKSLGLLCSNFLSLYNHDGVHSIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLSRKAKNQYSWNG 88 79***************999********.....****************************98 PP
2	E2F_TDP	25.6	2e-08	158	200	1	38
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....d 38 r+eksL lltq+f+kl+ +s+ +++l+e+ak L+ + XP_022924095.1 158 RREKSLALLTQNFVKLFICSHVSMISLDEAAKLLLGDghnssI 200 689*******************************988665551 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER 60 RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS 120 DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KAVSADNRRE KSLALLTQNF VKLFICSHVS 180 MISLDEAAKL LLGDGHNSSI MRTKTHTADT RKPAFRWLGV RGKVKNEPTV LPESRKRAFG 240 TDVTNVSYKK TKAESSAYQG LNHCLNVQKL VQCENSSQED SQNSQDQECE RTSKSYQFGP 300 FSPITVAKVS VSDNNNVKRS HDWESLSSTF RPQYHNQALP PVYNFQLFFS TLLMFDIVTF 360 IALKELFSHY VEAWKSWYSE AVKKPIQIS

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MAALPSSSAL PDSCSSRHHT YSRKQKSLGL LCSNFLSLYN HDGVHSIGLD DAASRLGVER  60
RRIYDIVNVL ESVGVLSRKA KNQYSWNGFG AIPKALQDLK EEGLKENCSA SDGNDYAKVS  120
DDEDDDERFS NPTGSQNSTA AVPKSSSSSL KAVSADNRRE KSLALLTQNF VKLFICSHVS  180
MISLDEAAKL LLGDGHNSSI MRTKTHTADT RKPAFRWLGV RGKVKNEPTV LPESRKRAFG  240
TDVTNVSYKK TKAESSAYQG LNHCLNVQKL VQCENSSQED SQNSQDQECE RTSKSYQFGP  300
FSPITVAKVS VSDNNNVKRS HDWESLSSTF RPQYHNQALP PVYNFQLFFS TLLMFDIVTF  360
IALKELFSHY VEAWKSWYSE AVKKPIQIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-102	E2F/DP family protein