PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924150.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 289aa    MW: 31613.5 Da    PI: 6.5232
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924150.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.7e-1593137347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++++ ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022924150.1  93 PWTEEEHKLFLQGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 137
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MPMTEAGDVE MDAAGVTKEI MLFGVRVVVD PMRKSVSMNN LSQYEHPPSE ASNEDNGRNT  60
KSNVSAAAGY ASADDAVPNS GGIRERERKR GVPWTEEEHK LFLQGLQKVG KGDWRGISRN  120
FVKTRTPTQV ASHAQKYFLR RSNLNRRRRR SSLFDITTDS VKVAAGEEQI QLQDNSSQFQ  180
YLLPPPPPPP ETGNVNGYHP VMPTFPLPVC PAILPVPIPM DNLPLRHDNL ENDTSSTAEV  240
MPLNPTTPEL NLNSGALSLN LDSATSLTKH PAFQGISSMS SGDNIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.29e-54MYB_related family protein