PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924267.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 324aa    MW: 36348.3 Da    PI: 5.2352
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924267.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.91e-28121182159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     l+Dgy+WrKYGqK+++g++fpr YYrC+++   gC ++k+v+rs++dp+++++tY+g+H+++
  XP_022924267.1 121 LNDGYSWRKYGQKDIHGANFPRCYYRCSHRherGCLATKQVQRSDNDPNIFDVTYRGRHTCN 182
                     58***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEMEHKSLIT ELTQGKELAL QLRTHLHPSS SSSPAEPCFF LTEMIHSSFE KALLLLKFNS  60
SSSIMPDPTT HKIASVEEEG EGEPRKNKRK NSRDVLKRRK LLPKWTEEIK ICRGTAPEGP  120
LNDGYSWRKY GQKDIHGANF PRCYYRCSHR HERGCLATKQ VQRSDNDPNI FDVTYRGRHT  180
CNQSTNNLGL VSGSPQNEIS GDQGTGQNQQ RNPNSEILFN FGVKSEDFDD VFPPISFLSS  240
PMMDLPFFAD GGLSAAPVSS ATSEETAWDW SGYHGGGIQM VQSSEQSDMI SATTSVTNSP  300
ICNEDWDFDF DQNFPFDSLD FISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.19e-47WRKY family protein