PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924399.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 284aa MW: 31737.5 Da PI: 7.4752

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924399.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.4	2.5e-18	134	188	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_022924399.1 134 RKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 188 788899***********************************************98 PP
2	HD-ZIP_I/II	127.1	7.3e-41	134	223	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ +LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+ en+rL+kev+eLr +l XP_022924399.1 134 RKKLRLSKEQSMVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTGENRRLQKEVQELR-AL 223 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MGGRDDELRL TLSLGLGVTT RPSFQPTHIH RPSNSMHNHI RNGSWNELFQ FSDRNADSRS 60 FLRGIDVNRL PTVVDGEEEN GVSSPNSTVS SISGKRSERE AEAEAEAEAE AEAERASCSQ 120 GSDDEDGGGG DASRKKLRLS KEQSMVLEET FKEHNTLNPK QKLALAKQLN LRPRQVEVWF 180 QNRRARTKLK QTEVDCEYLK RCCENLTGEN RRLQKEVQEL RALKLSPQLY MHMNPPTTLT 240 MCPQCERVAV SSSSSTTCHP AAAAGVQRPS MPLNPWAAVL PIER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	139	SRKKLRL
2	183	191	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44910.1	1e-71	HD-ZIP family protein