PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924402.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 231aa MW: 26662.7 Da PI: 5.2854

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924402.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.9	9.9e-20	27	80	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +R++f++eq++ Le+ Fe+++ + +++ +LA +lgL rqV +WFqN+Ra++k XP_022924402.1 27 NRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWK 80 699**************************************************9 PP
2	HD-ZIP_I/II	120.2	1.1e-38	27	118	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ++rr+s+eq+k+LE+ Fe+e++Lep++K +la eLgl+prqva+WFqn+RAR+k+kqlE+dy++L+++y++l+++ e+L+ke+++L+ +l++ XP_022924402.1 27 NRRRFSEEQIKSLESIFESESRLEPRKKLQLAGELGLHPRQVAIWFQNKRARWKSKQLERDYSVLRANYNTLVSRFEALKKEKQALAIQLQK 118 589************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MLNDDDAEYS PPESMAEAFG MRKKSMNRRR FSEEQIKSLE SIFESESRLE PRKKLQLAGE 60 LGLHPRQVAI WFQNKRARWK SKQLERDYSV LRANYNTLVS RFEALKKEKQ ALAIQLQKLN 120 DLVQRSMEET ESCRGGLSLE TIDGKSENGH RTKYESEVKP CVSAEEKSEH ELEVLSNYGS 180 GTKEAYLGLD EPQFREPAQG SLISTPNWSN LESEGLFSQS NTNGQWWDFW S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	2e-59	HD-ZIP family protein