PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924421.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 215aa    MW: 24548 Da    PI: 9.7102
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924421.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.12.6e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrng+lKKA+ELSvLCdae a+iifsstgklye++s
  XP_022924421.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIIFSSTGKLYEFAS 59
                    8***********************************************86 PP
2K-box80.73.4e-2783171997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                      ++++ +s q+e++ L +eie+L+ ++R+llGe+L+s s++eLqq+e+qLe+sl +++++K+e+++eqie+l++kek l  en +L kk
  XP_022924421.1  83 SHQHDLQSVQNEATSLLDEIESLEVSKRKLLGEGLGSSSYEELQQIEKQLERSLAHVKARKYEIYKEQIEQLKEKEKYLAAENAKLAKK 171
                     467789********************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MVRGKTEMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AELALIIFSS TGKLYEFASS  60
SLQATVGRYL RHTKATHCLQ PPSHQHDLQS VQNEATSLLD EIESLEVSKR KLLGEGLGSS  120
SYEELQQIEK QLERSLAHVK ARKYEIYKEQ IEQLKEKEKY LAAENAKLAK KRFVQRELRQ  180
SSAQVGEVST HLDHSSIFDV ETELFIGPPR SRSIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.18e-68MIKC_MADS family protein