PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924563.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 291aa    MW: 33343.3 Da    PI: 5.726
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924563.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-1897146255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     r +r++lg++ taeeAa  +++a+ +l+g
  XP_022924563.1  97 KFRGVRRRP-WGKWAAEIRDPL----RrTRVWLGTYETAEEAAVVYDRAAVRLRG 146
                     89*******.**********73....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MEFQYPSMGR VCSAGIKFRE VRTITDKPAP ETKLVRISYT DGDATDSSSG EDEEPILIRH  60
VKRHVTEIRL LTSDCSKKPL PPKSRVKPPS NSESHRKFRG VRRRPWGKWA AEIRDPLRRT  120
RVWLGTYETA EEAAVVYDRA AVRLRGPNAF TNFVAEAPNS KTTVVTYLPP PPPPPPPENH  180
STAAVGVSYS KESRNHCSPT SVLRLEEQNW RPIEHLSEES GLEDEFNWLY DWNSNSFLFN  240
LRSPQPLFSD QMELEIPKWE DFGDISVDFD SCKWDVENYF QDPSFSIALT D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-43ERF family protein