PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924564.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 284aa    MW: 32460.3 Da    PI: 5.9998
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924564.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.4e-1890139255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp     r +r++lg++ taeeAa  +++a+ +l+g
  XP_022924564.1  90 KFRGVRRRP-WGKWAAEIRDPL----RrTRVWLGTYETAEEAAVVYDRAAVRLRG 139
                     89*******.**********73....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGRVCSAGIK FREVRTITDK PAPETKLVRI SYTDGDATDS SSGEDEEPIL IRHVKRHVTE  60
IRLLTSDCSK KPLPPKSRVK PPSNSESHRK FRGVRRRPWG KWAAEIRDPL RRTRVWLGTY  120
ETAEEAAVVY DRAAVRLRGP NAFTNFVAEA PNSKTTVVTY LPPPPPPPPP ENHSTAAVGV  180
SYSKESRNHC SPTSVLRLEE QNWRPIEHLS EESGLEDEFN WLYDWNSNSF LFNLRSPQPL  240
FSDQMELEIP KWEDFGDISV DFDSCKWDVE NYFQDPSFSI ALTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-43ERF family protein