PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924626.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 246aa    MW: 28299 Da    PI: 8.7725
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924626.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding569.3e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WTteEd++l+ ++k++G  +W++ ++  g+ R++k+c++rw +yl
   XP_022924626.1 14 KGPWTTEEDQILISYIKKHGHSNWRALPKLAGLFRCGKSCRLRWINYL 61
                     79********************************************97 PP
2Myb_DNA-binding47.15.5e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T +E+   + ++++lG++ W++Ia++++ gRt++++k++w+++l
   XP_022924626.1  67 RGNFTLQEQNMVLLLHEKLGNR-WSAIAAELP-GRTDNEIKNFWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MVRAPCCEKM GLKKGPWTTE EDQILISYIK KHGHSNWRAL PKLAGLFRCG KSCRLRWINY  60
LRPGVKRGNF TLQEQNMVLL LHEKLGNRWS AIAAELPGRT DNEIKNFWHT HLKKRVVYKQ  120
SHVYEKKSAD SAIVEAKSKS QKLDFSNHYE LPSSSFYPSP ITNSPTGCNE IQSEQHIEIF  180
EAFHQTCGGR WPEEPSTANF NGAFNSSTVN YEERDQWPSF RAMDDSMEFW YSVFVKAGGS  240
PTDPTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.18e-70MYB family protein