PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022924639.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 178aa    MW: 19399.9 Da    PI: 10.2626
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022924639.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.4e-057193123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_022924639.1 71 YTCNFCKREFRSAQALGGHMNVH 93
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MERNCLRTAC RTSLTTMNTT ISGGGAPAAA GGGGGGGPNG AGKSQRNKVC RAAAAAEEDF  60
INGISWPPRS YTCNFCKREF RSAQALGGHM NVHRRDRALL YSPPADHTHF TNLNLNLHHN  120
PFPNRPFKAL EIAKPNRNKP HKFIGLDIEI NTTNNTATLI TESKKKDIDL ELRLGYST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.12e-22C2H2 family protein