PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924745.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 244aa MW: 28736.3 Da PI: 9.0722

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924745.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.5e-18	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v+ +G g+W+++ar g++R +k+c++rw +yl XP_022924745.1 23 KGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYL 70 79****************************9***********97 PP
2	Myb_DNA-binding	49.4	1.1e-15	76	120	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ W+ Iar ++ gRt++++k++w+++ XP_022924745.1 76 RGQITPHEESIILELHARWGNR-WSMIARSLP-GRTDNEIKNYWRTH 120 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MFNLRAMVGH WSWGLVEDEV WRKGPWTAEE DRLLMEYVRI YGEGRWNSVA RLTGLKRNGK 60 SCRLRWVNYL RPDLKRGQIT PHEESIILEL HARWGNRWSM IARSLPGRTD NEIKNYWRTH 120 FKKKEKDSSD ANGKAKARLL RRQQFHQQQL QQQQQQQYNP MDMNKIMALL EEEHDKNNIS 180 EALSSSASET EKRQNTTNFH SQTANNEQSL LSELNTNGFV LPEILNEGLE VGWAMELGGC 240 PWQW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13480.1	1e-71	MYB family protein