PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022924826.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 468aa MW: 51489.5 Da PI: 10.2367

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022924826.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.3	3.2e-24	145	189	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++ep+rCrRtDGKkWRCsr++++ +k+CErH+hrgr+rsrk++e+ XP_022924826.1 145 EPEPWRCRRTDGKKWRCSRQTVPHQKYCERHMHRGRQRSRKPVEA 189 69****************************************997 PP
2	WRC	58.4	1.2e-18	359	398	2	41
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 epgrCrRtDGKkWRC+r+ ++++k+C H+hrg+++ k XP_022924826.1 359 REPGRCRRTDGKKWRCRRDIIPNQKYCSLHMHRGSKKHLK 398 69********************************877655 PP
3	QLQ	41.9	3.1e-15	88	118	7	37
QLQ 7 QlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 Qlq+L++Q+l+ KyLaa++ vP +Ll++i+k XP_022924826.1 88 QLQELEQQVLIHKYLAAGLRVPTHLLVPIWK 118 *****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MEVHPLQSFP SSETGRGLRR RKTDEATTAA MMMKVKKESN QTENDELSAP VSPSINLGLQ 60 IGTNSAGSRN EGTSIVHRSR ESLITVGQLQ ELEQQVLIHK YLAAGLRVPT HLLVPIWKSV 120 ARTLGSNVNV IGFNPVGFDY GSMMEPEPWR CRRTDGKKWR CSRQTVPHQK YCERHMHRGR 180 QRSRKPVEAS ENDSTSKKIL LNNPDRDIRC TLDVTTANPF PHVGAVVPEP KTVSYARPKS 240 ATETITSSMR GASAIGMSCA DATKTIRMIP SSAATCITTV PSINPTATTS VPTSYIVNLK 300 DACNMNLREN CSKSRIDFGR NDINIQKITS PGLGFSPNSV LQVSGCSSSL CDSKINLERE 360 PGRCRRTDGK KWRCRRDIIP NQKYCSLHMH RGSKKHLKPS QNAPVLAPSA ATYGSSLLPT 420 PLKKLEPATP NTNLSMSIQA DDKQRHNEAR NNASSSSETT ITDTTITA

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MEVHPLQSFP SSETGRGLRR RKTDEATTAA MMMKVKKESN QTENDELSAP VSPSINLGLQ  60
IGTNSAGSRN EGTSIVHRSR ESLITVGQLQ ELEQQVLIHK YLAAGLRVPT HLLVPIWKSV  120
ARTLGSNVNV IGFNPVGFDY GSMMEPEPWR CRRTDGKKWR CSRQTVPHQK YCERHMHRGR  180
QRSRKPVEAS ENDSTSKKIL LNNPDRDIRC TLDVTTANPF PHVGAVVPEP KTVSYARPKS  240
ATETITSSMR GASAIGMSCA DATKTIRMIP SSAATCITTV PSINPTATTS VPTSYIVNLK  300
DACNMNLREN CSKSRIDFGR NDINIQKITS PGLGFSPNSV LQVSGCSSSL CDSKINLERE  360
PGRCRRTDGK KWRCRRDIIP NQKYCSLHMH RGSKKHLKPS QNAPVLAPSA ATYGSSLLPT  420
PLKKLEPATP NTNLSMSIQA DDKQRHNEAR NNASSSSETT ITDTTITA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45480.1	2e-46	GRF family protein