PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925040.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 314aa    MW: 35429.1 Da    PI: 8.2404
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925040.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.22.7e-12134180455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +hn   r+RRdriN+++  L++l+P+       K++ a+ L  +++Y+k+Lq
  XP_022925040.1 134 NHNRSNRKRRDRINQKMKDLQKLVPNG-----SKMDRASLLDDTIQYLKQLQ 180
                     7*************************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MSMSHWTVPN WNPMPKYGRP CARGDEQEAA MDAHVEVLFQ TPLTNHSWSQ SDDTLESIVH  60
SSLSRKWTRS NPDCKNEALM SWASMESHGS FKTDDSVEDL AQDDGSVMHK EDDHNMKGKA  120
DGSSSIRRTR AAINHNRSNR KRRDRINQKM KDLQKLVPNG SKMDRASLLD DTIQYLKQLQ  180
AQVQFMYSIR SIVPQMVMPL GIQQQQQLQM SLLAAHMGLL HTHSKAPSSS SFPCAAAFPP  240
PPFLLPSINS TTKPKSNLST SAFAPPTDPF CTFLAQSMDM DFYSKMVTLY CQEVNKTPRQ  300
AGKFEGIKED MHYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.12e-24bHLH family protein