PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925193.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 257aa    MW: 29339.3 Da    PI: 6.5085
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925193.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH444e-1478129155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++iNs ++ Lr+llP+    ++ Kls  ++  +   YI +Lq
  XP_022925193.1  78 KKLSHNASERDRRKKINSLYSSLRSLLPST---DHMKLSNPATISRILSYIPELQ 129
                     6789*************************9...9******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MLVASSPLFS PHQWPLDDPI SFHHQHNYHF SLFEPSDHSF HVQFSPPPLQ LPHVELDNYP  60
SIATPLPDGG TKVSNVAKKL SHNASERDRR KKINSLYSSL RSLLPSTDHM KLSNPATISR  120
ILSYIPELQQ QVEGLMRKKE ELMTAMVGQE VDSDEEKRKK CAATTSSSSI ISATRLGRRE  180
MAVQICTDID RGHRNSLSEL FVCLEEDGLL LWNASSFESF DGKVFHNLHL QMESSCRMEP  240
EMVSIKILEM FHERERE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-29bHLH family protein