PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925194.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 244aa    MW: 27370.2 Da    PI: 10.629
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925194.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.62e-1274125154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 
                     ++ +hn+ Er RR+++Ns +  Lr llP+    + +K +s  ++  +A +YI +L
  XP_022925194.1  74 KKLKHNASERDRRKKMNSLYTSLRCLLPST---NRTKtMSNPATISRALKYIPEL 125
                     5789*************************8...78888**************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MLAMIPSSST THGGWIPGNP QSTNGRSSEL FIQFSSPRPS HHVKVESCSP PSAGDGRHRG  60
GGGCGGDDPV AVAKKLKHNA SERDRRKKMN SLYTSLRCLL PSTNRTKTMS NPATISRALK  120
YIPELRQHVE ELRRRKQGLE TKINAITHDQ QKQVRKNKEA PWMGCSSCAV NWLRENEALL  180
QLTSNDTFKL KFSQILHSLD EDELLVKTVS TFQSFDGRHF VTLLVQAKPN TPSRVLQEIL  240
NRKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.16e-30bHLH family protein