PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925393.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 316aa    MW: 33649.5 Da    PI: 6.9378
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925393.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79e-21135185155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa+a++ a+++++g
  XP_022925393.1 135 TRYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFDTAEAAARAYDSAALRFRG 185
                     68********.**********93....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MCFLKVANHG GGNGGRDDPE AMFSSEGELM AMVSALTHVI SGGAVRASGV DCSSREDAPV  60
TVAVPTMTAT GCSRKREREE EGGIVEFRAI QSYSTPSPAI LKEEGGSSSS NPIPAATAMA  120
ATTTAEFPGK EITRTRYRGV RQRPWGKWAA EIRDPQKAAR VWLGTFDTAE AAARAYDSAA  180
LRFRGSKAKL NFPEFVTTLP PSSPPTPNLV LSPVVRPPVF PFDSDYLQYS HLIQNSGENS  240
VQPALTFDRV LSNSPFVNPN SLISSSGTSS GASNFDLPFS QQQIAYFRPP ENQSHGGGGS  300
SMPPPTEFGY RPPATG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-25ERF family protein