PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925574.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 460aa MW: 51761.9 Da PI: 5.0754

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925574.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.1	9.4e-26	134	199	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++++gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn i wkg XP_022925574.1 134 RYDSSLGLLTKKFINLIKQARDGILDLNKAAETL---QV--QKRRIYDITNVLEGIGLIEKKLKNIIYWKG 199 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MRGGSRAPNR SEPLPHSQTA QILPPLKRQL AFESNKPLRA SSNSFDQEPD SIAVKPLKPK 60 QTGVMYTNVV ESNDCIQDQG FSKDSLSSVQ TPVSAKGGRM YNKSKTSRRM TSGTQTPISD 120 TSIYSPLTPA GNCRYDSSLG LLTKKFINLI KQARDGILDL NKAAETLQVQ KRRIYDITNV 180 LEGIGLIEKK LKNIIYWKGF NTQVPGNVDS DTSMLQVDVE NLSFEERRLN DKIRTLQERL 240 RNLSEDENLQ KWLFVTEEDI KSLPCFQNET LIAIKAPHGT TLEVPDPDEA VDYPQRRYRI 300 VLRSTMGPID VYLVSQFEEK FEEVNVVKPP RNFLHASSSG SNEHLATEAI RESSRDEIEP 360 QAHLSQYSSS CDVNGSNEFP GGMMKIIPSE FDNDADYWLL SDAEVSITDM WRTDSDIAWD 420 ESHMVSQDFL ISDVSAQRPR PGSPHSETVE APSDVNSRQR

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MRGGSRAPNR SEPLPHSQTA QILPPLKRQL AFESNKPLRA SSNSFDQEPD SIAVKPLKPK  60
QTGVMYTNVV ESNDCIQDQG FSKDSLSSVQ TPVSAKGGRM YNKSKTSRRM TSGTQTPISD  120
TSIYSPLTPA GNCRYDSSLG LLTKKFINLI KQARDGILDL NKAAETLQVQ KRRIYDITNV  180
LEGIGLIEKK LKNIIYWKGF NTQVPGNVDS DTSMLQVDVE NLSFEERRLN DKIRTLQERL  240
RNLSEDENLQ KWLFVTEEDI KSLPCFQNET LIAIKAPHGT TLEVPDPDEA VDYPQRRYRI  300
VLRSTMGPID VYLVSQFEEK FEEVNVVKPP RNFLHASSSG SNEHLATEAI RESSRDEIEP  360
QAHLSQYSSS CDVNGSNEFP GGMMKIIPSE FDNDADYWLL SDAEVSITDM WRTDSDIAWD  420
ESHMVSQDFL ISDVSAQRPR PGSPHSETVE APSDVNSRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-140	E2F/DP family protein