PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925726.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 375aa MW: 40180.2 Da PI: 7.6549

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925726.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.5	1.7e-40	73	189	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s + XP_022925726.1 73 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSTMSVPsqlrsss 167 789******************************************************************99988888888888666665555555 PP TCP 89 .....................k 89 + XP_022925726.1 168 yynpnfslhpprrtlfpgfglS 189 5555555656655555555552 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MEGGDDLHRY HHHHHNHHHH HRPNFPFQLL EKKDDDDATA ASCSTSPYPS LAISTDPTTT 60 AAAAAVEPSK KPPPKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE 120 WLLQQAEPSV IAATGTGTIP ANFTSLNISL RSSGSTMSVP SQLRSSSYYN PNFSLHPPRR 180 TLFPGFGLSS ETSSTALLNF QSTNTGNSLL QAKPELRDTT TSLDLSDAVE DISIGRKRRP 240 SSEQEFSTGA IPASGGQVPA NLWMLANTNN QGMGVDPIWT FPSVNNSGLY RGTMSSGLHF 300 MNFPGPVTLV PGQQLGSSAS GGSNSSSEAH FNILAGLNPY RSLSSSGVME AQGSGSQSHH 360 GGGGDDRHDT TSHHS

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MEGGDDLHRY HHHHHNHHHH HRPNFPFQLL EKKDDDDATA ASCSTSPYPS LAISTDPTTT  60
AAAAAVEPSK KPPPKRTSTK DRHTKVDGRG RRIRMPALCA ARVFQLTREL GHKSDGETIE  120
WLLQQAEPSV IAATGTGTIP ANFTSLNISL RSSGSTMSVP SQLRSSSYYN PNFSLHPPRR  180
TLFPGFGLSS ETSSTALLNF QSTNTGNSLL QAKPELRDTT TSLDLSDAVE DISIGRKRRP  240
SSEQEFSTGA IPASGGQVPA NLWMLANTNN QGMGVDPIWT FPSVNNSGLY RGTMSSGLHF  300
MNFPGPVTLV PGQQLGSSAS GGSNSSSEAH FNILAGLNPY RSLSSSGVME AQGSGSQSHH  360
GGGGDDRHDT TSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	8e-55	TCP family protein