PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022925758.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 286aa    MW: 32114.9 Da    PI: 7.571
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022925758.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.62.5e-1624114186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++ + +L+++  ++  +l+rg+l++++W++v++++     ++++ +r+ +qCk++++ ++k+yk +k++ +  +  ++s++p++d+l+
  XP_022925758.1  24 CWSEEATSTLVDVWGRRFVELNRGNLRQKDWQDVAEAVnalhgHSKKTHRTDVQCKNRIDTIKKKYKIEKARVSASNGSVTSSWPFYDRLD 114
                     7******************************************9****************************9999999999*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MGDLNDSLTP SSGHSRPMPV REDCWSEEAT STLVDVWGRR FVELNRGNLR QKDWQDVAEA  60
VNALHGHSKK THRTDVQCKN RIDTIKKKYK IEKARVSASN GSVTSSWPFY DRLDGLIGSN  120
FSQKKPSTSM SQSPPMARPL SYRKAPSSGT ANAVSVAIPQ KRPLAAVDDG FFRRNYSAMA  180
AAAAATEAAE DEEEEEAEAE AEERGSEDEE GEGEGMRRLA KAIGRFGKMY ERVEAEKLRQ  240
MVELEKQRMQ FAKDLEVQRM QMFTETQVQL ERIKRGKKSG SNDIYG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.14e-64Trihelix family protein