PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925803.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 437aa MW: 50471.6 Da PI: 8.9027

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925803.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.4e-11	315	362	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W++I r++ +Rt+ +++++w+++l XP_022925803.1 315 WTLTEVMRLVDGIAEYGTGRWTRIKRHLFassPHRTPIDLRDKWRNLL 362 **************************99**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MDQEVHFCQK FTNMNYHWVK MEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR 60 DFGYEIQTND AEVDENSFRQ NRGLQLGKPS SESKSQGSSR SDTDAFEISE LSATMVMEAE 120 FNNTPVERSL TRELFSGLRT RGGCATPFEG NICDTILDNN NIHKFNTNEN YLENEKISDE 180 NVKGDIVASK LASCSRERRL RKPTRRYIEE FADSKSENNK GRRKPPTKDK YLKVTSTEES 240 NHIRHKVQML TPKDESHCGT SVPVQSRSQR RHPEKHVPVS GFLSEDEPSA TECKNVYSSA 300 KICKKYDRRK HQKMWTLTEV MRLVDGIAEY GTGRWTRIKR HLFASSPHRT PIDLRDKWRN 360 LLKASCVNIQ NSKGTECKQP HASRPLPKSL LQRVYELANI YPYPKERSPK PVREATPPMY 420 LIESNSLSFN WGRKKYE

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MDQEVHFCQK FTNMNYHWVK MEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR  60
DFGYEIQTND AEVDENSFRQ NRGLQLGKPS SESKSQGSSR SDTDAFEISE LSATMVMEAE  120
FNNTPVERSL TRELFSGLRT RGGCATPFEG NICDTILDNN NIHKFNTNEN YLENEKISDE  180
NVKGDIVASK LASCSRERRL RKPTRRYIEE FADSKSENNK GRRKPPTKDK YLKVTSTEES  240
NHIRHKVQML TPKDESHCGT SVPVQSRSQR RHPEKHVPVS GFLSEDEPSA TECKNVYSSA  300
KICKKYDRRK HQKMWTLTEV MRLVDGIAEY GTGRWTRIKR HLFASSPHRT PIDLRDKWRN  360
LLKASCVNIQ NSKGTECKQP HASRPLPKSL LQRVYELANI YPYPKERSPK PVREATPPMY  420
LIESNSLSFN WGRKKYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	197	203	ERRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	2e-24	MYB_related family protein