PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022925805.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 418aa MW: 47960.8 Da PI: 9.0102

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022925805.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.8	7.9e-11	296	343	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W++I r++ +Rt+ +++++w+++l XP_022925805.1 296 WTLTEVMRLVDGIAEYGTGRWTRIKRHLFassPHRTPIDLRDKWRNLL 343 **************************99**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR DFGYEIQTNG DAEVDENSFR 60 QNRGLQLGKP SSESKSQGSS RSDTDAFEIS ELSATMVMEA EFNNTPVERS LTRELFSGLR 120 TRGGCATPFE GNICDTILDN NNIHKFNTNE NYLENEKISD ENVKGDIVAS KLASCSRERR 180 LRKPTRRYIE EFADSKSENN KGRRKPPTKD KYLKVTSTEE SNHIRHKVQM LTPKDESHCG 240 TSVPVQSRSQ RRHPEKHVPV SGFLSEDEPS ATECKNVYSS AKICKKYDRR KHQKMWTLTE 300 VMRLVDGIAE YGTGRWTRIK RHLFASSPHR TPIDLRDKWR NLLKASCVNI QNSKGTECKQ 360 PHASRPLPKS LLQRVYELAN IYPYPKERSP KPVREATPPM YLIESNSLSF NWGRKKYE

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR DFGYEIQTNG DAEVDENSFR  60
QNRGLQLGKP SSESKSQGSS RSDTDAFEIS ELSATMVMEA EFNNTPVERS LTRELFSGLR  120
TRGGCATPFE GNICDTILDN NNIHKFNTNE NYLENEKISD ENVKGDIVAS KLASCSRERR  180
LRKPTRRYIE EFADSKSENN KGRRKPPTKD KYLKVTSTEE SNHIRHKVQM LTPKDESHCG  240
TSVPVQSRSQ RRHPEKHVPV SGFLSEDEPS ATECKNVYSS AKICKKYDRR KHQKMWTLTE  300
VMRLVDGIAE YGTGRWTRIK RHLFASSPHR TPIDLRDKWR NLLKASCVNI QNSKGTECKQ  360
PHASRPLPKS LLQRVYELAN IYPYPKERSP KPVREATPPM YLIESNSLSF NWGRKKYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	178	184	ERRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	2e-24	MYB_related family protein